Co-authored publications with mentees

Christopher E Mason, PhD · 171 publications across 27 mentees

CSV Word

MD mentee

Cell-free DNA (cfDNA) and Exosome Profiling from a Year-Long Human Spaceflight Reveals Circulating Biomarkers.
iScience · 2020
CEChristopher E MasonTDTimothy DonahoeKGKirill GrigorevCMCem MeydanFAFanny A Pelissier Vatter+10 more →
PMID: 33376973PMCID: PMC7756145DOI50 citations
With Timothy Donahoe · MD mentee · Class of 2020
A synthesis of bacterial and archaeal phenotypic trait data.
Scientific data · 2020
CEChristopher E MasonDADavid A WestfallDDDavid DankoHSHeba Shaaban
PMID: 32503990PMCID: PMC7275036DOI108 citations
With David Westfall · MD mentee · Class of 2019
Translating current biomedical therapies for long duration, deep space missions.
Precision clinical medicine · 2019
CEChristopher E MasonSISonia IosimMMMatthew MacKayCWCraig Westover
PMID: 31886035PMCID: PMC6927098DOI34 citations
With Sonia Iosim · MD mentee · Class of 2021
The Microbe Directory: An annotated, searchable inventory of microbes' characteristics.
Gates open research · 2018
CEChristopher E MasonDADavid A WestfallHSHeba ShaabanDDDavid Danko
PMID: 29630066PMCID: PMC5883067DOI16 citations
With David Westfall · MD mentee · Class of 2019
Precision Metagenomics: Rapid Metagenomic Analyses for Infectious Disease Diagnostics and Public Health Surveillance.
Journal of biomolecular techniques : JBT · 2017
CEChristopher E Mason CCChou ChouANAudrey N Schuetz
PMID: 28337072PMCID: PMC5360386DOI61 citations
With Chou Chou · MD mentee · Class of 2018

PhD mentee

Long-term major histocompatibility complex class I suppression in astronauts and clinical implications.
Communications biology · 2026
CEChristopher E MasonLILucinda InnesJKJangKeun KimZFZachary FeinsteinDZDaniel Zuniga Gamboa+1 more →
PMID: 42562863PMCID: PMC13448508DOI
With Lucinda Innes · Physiology, Biophysics & Systems Biology (PhD)
Long-term major histocompatibility complex class I suppression in astronauts and clinical implications.
Communications biology · 2026
CEChristopher E MasonZFZachary FeinsteinJKJangKeun KimLILucinda InnesDZDaniel Zuniga Gamboa+1 more →
PMID: 42562863PMCID: PMC13448508DOI
With Zachary Feinstein · Physiology, Biophysics & Systems Biology (PhD)
Diversity and distinctive characteristics of the global RNA virome in urban and peri-urban environments.
Nature communications · 2026
CEChristopher E Mason ALAlexander LucaciMAMaria A Sierra
PMID: 42463489PMCID: PMC13377081DOI
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Five genome sequences of bacterial environmental isolates from Gilkey Glacier, Juneau Icefield, Alaska.
Microbiology resource announcements · 2026
CEChristopher E Mason CCChristopher Chin
PMID: 42390447PMCID: PMC13460035DOI
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Derivation of elephant induced pluripotent stem cells.
Nature methods · 2026
PMID: 42332088DOI1 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
Simulated spaceflight disrupts the immune-gut-brain axis and drives sex-dependent neuroinflammation, axonal injury, and behavioral deficits.
bioRxiv : the preprint server for biology · 2026
CEChristopher E MasonMBMarissa BurkeSVSonia Villapol
PMID: 42039636PMCID: PMC13104848DOI
With Marissa Burke · Physiology, Biophysics & Systems Biology (PhD)
SPEN Loss Drives Extrafollicular Diffuse Large B-cell Lymphoma with Female-Specific Lethality and Therapeutic Vulnerabilities.
Cancer discovery · 2026
CEChristopher E Mason CCChristopher ChinBPBenedikt PelzerCMCem Meydan+16 more →AMAri M. Melnick
PMID: 42013317PMCID: PMC13197974DOI1 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
SPEN Loss Drives Extrafollicular Diffuse Large B-cell Lymphoma with Female-Specific Lethality and Therapeutic Vulnerabilities.
Cancer discovery · 2026
CEChristopher E MasonCDCeyda DurmazBPBenedikt PelzerCMCem Meydan+16 more →AMAri M. Melnick
PMID: 42013317PMCID: PMC13197974DOI1 citations
With Ceyda Durmaz · Physiology, Biophysics & Systems Biology (PhD) · Class of 2026
Diverse high-fat diets drive multi-omic reprogramming that persists after dietary reversal.
bioRxiv : the preprint server for biology · 2026
CEChristopher E MasonCDCeyda DurmazJPJiwoon ParkEOElif OzcelikTMTheodore M Nelson+2 more →
PMID: 41889866PMCID: PMC13015288DOI
With Ceyda Durmaz · Physiology, Biophysics & Systems Biology (PhD) · Class of 2026
Diverse high-fat diets drive multi-omic reprogramming that persists after dietary reversal.
bioRxiv : the preprint server for biology · 2026
PMID: 41889866PMCID: PMC13015288DOI
With Elif Ozcelik · Physiology, Biophysics & Systems Biology (PhD)
Signaling induced biophysical disruption of repressed chromatin domains drives immune cell fate.
bioRxiv : the preprint server for biology · 2025
CEChristopher E Mason CCChristopher ChinMKMythili KetavarapuJTJeremy T Chang+9 more →SZSteven Zvi Josefowicz
PMID: 41427328PMCID: PMC12713132DOI
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Point of care testing of biochemical markers for monitoring astronauts during long duration missions in deep space.
Clinical chemistry and laboratory medicine · 2025
CEChristopher E MasonRCRafael Colon
PMID: 41140086DOI4 citations
With Rafael Colon · Physiology, Biophysics & Systems Biology (PhD)
Astroimmunology: the effects of spaceflight and its associated stressors on the immune system.
Nature reviews. Immunology · 2025
CEChristopher E MasonMBMarissa Burke
PMID: 41102553PMCID: PMC12903758DOI8 citations
With Marissa Burke · Physiology, Biophysics & Systems Biology (PhD)
The Microbe Directory: a centralized database for biological interpretation of microbiome data.
Database : the journal of biological databases and curation · 2025
CEChristopher E MasonMSMaria Sierra GarciaCBChandrima BhattacharyaHSHeba Shaaban
PMID: 40996703PMCID: PMC12462379DOI
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Wild-type p53 overexpression in NPM1-mutated acute myeloid leukemia: potential implications for disease biology and therapy response.
Haematologica · 2025
CEChristopher E Mason CCChristopher Chin PDPaul Dylan BaroneSDSiarhei Dzedzik+9 more →SPSanjay Patel
PMID: 40931876PMCID: PMC12951132DOI
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Global biogeography of airborne viruses in public transit systems and their host interactions.
Microbiome · 2025
CEChristopher E MasonDCDavid C DankoDBDaniela BezdanALAlexander Lucaci CMCem Meydan+1 more →
PMID: 40883783PMCID: PMC12395665DOI5 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs.
bioRxiv : the preprint server for biology · 2025
PMID: 40611896PMCID: PMC12224548DOI
With Elif Ozcelik · Physiology, Biophysics & Systems Biology (PhD)
Distinct bacteria display genus and species-specific associations with mycobionts in paramo lichens in Colombia.
FEMS microbiology ecology · 2025
CEChristopher E MasonMSMaria Sierra Garcia
PMID: 39880798PMCID: PMC11800485DOI2 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
The challenges and opportunities in creating a One Health warning system for pandemics
Cell Reports Sustainability · 2025
Source: ScopusDOI
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Astronaut multi-omics
Fundamentals of Space Medicine and Clinical Technology · 2025
Source: ScopusDOI
With Marissa Burke · Physiology, Biophysics & Systems Biology (PhD)
Astronaut multi-omics
Fundamentals of Space Medicine and Clinical Technology · 2025
Source: ScopusDOI
With Zachary Feinstein · Physiology, Biophysics & Systems Biology (PhD)
The Cornell Aerospace Medicine Biobank: Increasing Accessibility to Human Space Medicine Samples and Enabling a Collaborative, Multi-Omic Space Medicine Research Ecosystem
Proceedings of the International Astronautical Congress Iac · 2025
Source: ScopusDOI
With Marissa Burke · Physiology, Biophysics & Systems Biology (PhD)
DOGMA-seq and multimodal, single-cell analysis in acute myeloid leukemia.
International review of cell and molecular biology · 2024
CEChristopher E MasonJGJuan Garcia-MedinaJKJangKeun Kim SGSaravanan Ganesan AMAri M. Melnick
PMID: 39864897PMCID: PMC12368869DOI3 citations
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
Alzheimer's disease-associated CD83(+) microglia are linked with increased immunoglobulin G4 and human cytomegalovirus in the gut, vagal nerve, and brain.
Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
CEChristopher E MasonMSMaria Sierra Garcia
PMID: 39698934PMCID: PMC11772737DOI14 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Iron Chelation Therapy Elicits Innate Immune Control of Metastatic Ovarian Cancer.
Cancer discovery · 2024
CEChristopher E Mason CSCamilla SalvagnoCCChang-Suk ChaePGPaolo Giovanelli+14 more →JRJuan R Cubillos-Ruiz
PMID: 39073085PMCID: PMC11452292DOI30 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Hypoxic Memory Mediates Prolonged Tumor-Intrinsic Type I Interferon Suppression to Promote Breast Cancer Progression.
Cancer research · 2024
CEChristopher E Mason CCChristopher Chin
PMID: 38990731PMCID: PMC11444891DOI13 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Transcriptomics analysis reveals molecular alterations underpinning spaceflight dermatology.
Communications medicine · 2024
CEChristopher E Mason CCChristopher Chin CMCem Meydan EOEliah Overbey JPJiwoon Park
PMID: 38862781PMCID: PMC11166967DOI8 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight.
Nature microbiology · 2024
CEChristopher E MasonBTBraden T TierneyJKJangKeun Kim EOEliah OverbeyJFJonathan Foox+7 more →
PMID: 38862604PMCID: PMC11222149DOI68 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight.
Nature microbiology · 2024
PMID: 38862604PMCID: PMC11222149DOI76 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight.
Nature microbiology · 2024
CEChristopher E MasonJGJuan Garcia-MedinaBTBraden T TierneyJKJangKeun Kim EOEliah Overbey+7 more →
PMID: 38862604PMCID: PMC11222149DOI68 citations
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
Spatiotemporal expression and control of haemoglobin in space.
Nature communications · 2024
CEChristopher E Mason CCChristopher Chin JKJangKeun KimIDIwijn De VlaminckIMIrina Matei+3 more →
PMID: 38862545PMCID: PMC11166948DOI8 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Single-cell multi-ome and immune profiles of the Inspiration4 crew reveal conserved, cell-type, and sex-specific responses to spaceflight.
Nature communications · 2024
CEChristopher E Mason CCChristopher Chin JKJangKeun KimBTBraden T TierneyEOEliah Overbey+12 more →
PMID: 38862516PMCID: PMC11166952DOI66 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Single-cell multi-ome and immune profiles of the Inspiration4 crew reveal conserved, cell-type, and sex-specific responses to spaceflight.
Nature communications · 2024
CEChristopher E MasonMMMatthew MackayJKJangKeun KimBTBraden T TierneyEOEliah Overbey+12 more →
PMID: 38862516PMCID: PMC11166952DOI66 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Single-cell multi-ome and immune profiles of the Inspiration4 crew reveal conserved, cell-type, and sex-specific responses to spaceflight.
Nature communications · 2024
PMID: 38862516PMCID: PMC11166952DOI72 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
Collection of biospecimens from the inspiration4 mission establishes the standards for the space omics and medical atlas (SOMA).
Nature communications · 2024
CEChristopher E MasonMMMatthew MacKayEOEliah OverbeyBTBraden T TierneyIMIrina Matei+5 more →
PMID: 38862509PMCID: PMC11166662DOI33 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Collection of biospecimens from the inspiration4 mission establishes the standards for the space omics and medical atlas (SOMA).
Nature communications · 2024
CEChristopher E MasonJGJuan Garcia-MedinaEOEliah OverbeyBTBraden T TierneyMMMatthew MacKay+5 more →
PMID: 38862509PMCID: PMC11166662DOI33 citations
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
Collection of biospecimens from the inspiration4 mission establishes the standards for the space omics and medical atlas (SOMA).
Nature communications · 2024
CEChristopher E MasonLILucinda InnesEOEliah OverbeyBTBraden T TierneyMMMatthew MacKay+5 more →
PMID: 38862509PMCID: PMC11166662DOI33 citations
With Lucinda Innes · Physiology, Biophysics & Systems Biology (PhD)
Direct RNA sequencing of astronaut blood reveals spaceflight-associated m6A increases and hematopoietic transcriptional responses.
Nature communications · 2024
PMID: 38862496PMCID: PMC11166648DOI27 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
Spatial multi-omics of human skin reveals KRAS and inflammatory responses to spaceflight.
Nature communications · 2024
CEChristopher E MasonMMMatthew MacKayJPJiwoon Park EOEliah OverbeyBTBraden T Tierney+2 more →
PMID: 38862494PMCID: PMC11166909DOI33 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction.
Nature communications · 2024
PMID: 38862484PMCID: PMC11167060DOI56 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
Secretome profiling reveals acute changes in oxidative stress, brain homeostasis, and coagulation following short-duration spaceflight.
Nature communications · 2024
CEChristopher E Mason CCChristopher ChinNHNadia HouerbiJKJangKeun Kim EOEliah Overbey+10 more →
PMID: 38862464PMCID: PMC11166969DOI36 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Secretome profiling reveals acute changes in oxidative stress, brain homeostasis, and coagulation following short-duration spaceflight.
Nature communications · 2024
CEChristopher E MasonMMMatthew MacKayNHNadia HouerbiJKJangKeun Kim EOEliah Overbey+10 more →
PMID: 38862464PMCID: PMC11166969DOI36 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Secretome profiling reveals acute changes in oxidative stress, brain homeostasis, and coagulation following short-duration spaceflight.
Nature communications · 2024
PMID: 38862464PMCID: PMC11166969DOI39 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E Mason CCChristopher Chin EOEliah Overbey JKJangKeun KimBTBraden T Tierney+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E MasonMMMatthew MacKayEOEliah Overbey JKJangKeun KimBTBraden T Tierney+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E Mason EOEliah Overbey JKJangKeun KimBTBraden T TierneyJPJiwoon Park+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
PMID: 38862028PMCID: PMC11357981DOI112 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E MasonJGJuan Garcia-MedinaEOEliah Overbey JKJangKeun KimBTBraden T Tierney+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E MasonKGKirill GrigorevEOEliah Overbey JKJangKeun KimBTBraden T Tierney+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Kirill Grigorev · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E MasonMBMarissa BurkeEOEliah Overbey JKJangKeun KimBTBraden T Tierney+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Marissa Burke · Physiology, Biophysics & Systems Biology (PhD)
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E MasonCWCraig WestoverEOEliah Overbey JKJangKeun KimBTBraden T Tierney+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Craig Westover · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
CEChristopher E Mason CCChristopher ChinMBMarissa BurkeIDIwijn De VlaminckZFZachary Feinstein+13 more →
PMID: 38862027PMCID: PMC12366838DOI56 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
CEChristopher E MasonMMMatthew MacKayMBMarissa BurkeCCChristopher ChinIDIwijn De Vlaminck+13 more →
PMID: 38862027PMCID: PMC12366838DOI56 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
CEChristopher E MasonMBMarissa BurkeCCChristopher ChinIDIwijn De VlaminckZFZachary Feinstein+13 more →
PMID: 38862027PMCID: PMC12366838DOI56 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
PMID: 38862027PMCID: PMC12366838DOI64 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
CEChristopher E MasonJGJuan Garcia-MedinaMBMarissa BurkeCCChristopher ChinIDIwijn De Vlaminck+13 more →
PMID: 38862027PMCID: PMC12366838DOI56 citations
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
CEChristopher E MasonMBMarissa BurkeCCChristopher ChinIDIwijn De VlaminckZFZachary Feinstein+13 more →
PMID: 38862027PMCID: PMC12366838DOI56 citations
With Marissa Burke · Physiology, Biophysics & Systems Biology (PhD)
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
CEChristopher E MasonZFZachary FeinsteinMBMarissa BurkeCCChristopher ChinIDIwijn De Vlaminck+13 more →
PMID: 38862027PMCID: PMC12366838DOI56 citations
With Zachary Feinstein · Physiology, Biophysics & Systems Biology (PhD)
Molecular and physiological changes in the SpaceX Inspiration4 civilian crew.
Nature · 2024
PMID: 38862026PMCID: PMC11357997DOI59 citations
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
Molecular and physiological changes in the SpaceX Inspiration4 civilian crew.
Nature · 2024
CEChristopher E MasonJGJuan Garcia-MedinaEOEliah Overbey CMCem MeydanBTBraden Tierney+9 more →
PMID: 38862026PMCID: PMC11357997DOI52 citations
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
Molecular and physiological changes in the SpaceX Inspiration4 civilian crew.
Nature · 2024
CEChristopher E MasonKGKirill GrigorevEOEliah Overbey CMCem MeydanBTBraden Tierney+9 more →
PMID: 38862026PMCID: PMC11357997DOI52 citations
With Kirill Grigorev · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight.
Precision clinical medicine · 2024
CEChristopher E Mason CCChristopher ChinJGJuan Garcia-MedinaKSKarolina SienkiewiczEOEliah Overbey+8 more →
PMID: 38634106PMCID: PMC11022651DOI25 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight.
Precision clinical medicine · 2024
CEChristopher E MasonJGJuan Garcia-MedinaKSKarolina SienkiewiczEOEliah OverbeyMBMarissa Burke+8 more →
PMID: 38634106PMCID: PMC11022651DOI25 citations
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight.
Precision clinical medicine · 2024
CEChristopher E MasonMBMarissa BurkeJGJuan Garcia-MedinaKSKarolina SienkiewiczEOEliah Overbey+8 more →
PMID: 38634106PMCID: PMC11022651DOI25 citations
With Marissa Burke · Physiology, Biophysics & Systems Biology (PhD)
ARID1A orchestrates SWI/SNF-mediated sequential binding of transcription factors with ARID1A loss driving pre-memory B cell fate and lymphomagenesis.
Cancer cell · 2024
CEChristopher E Mason CCChristopher Chin DBDarko Barisic CMCem Meydan+8 more →AMAri M. Melnick
PMID: 38593783PMCID: PMC11421838DOI5 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
ARID1A orchestrates SWI/SNF-mediated sequential binding of transcription factors with ARID1A loss driving pre-memory B cell fate and lymphomagenesis.
Cancer cell · 2024
CEChristopher E MasonCDCeyda DurmazDBDarko Barisic CCChristopher Chin+8 more →AMAri M. Melnick
PMID: 38593783PMCID: PMC11421838DOI5 citations
With Ceyda Durmaz · Physiology, Biophysics & Systems Biology (PhD) · Class of 2026
Telomeres and aging: on and off the planet!
Biogerontology · 2024
CEChristopher E MasonMAMaria A Sierra
PMID: 38581556PMCID: PMC10998805DOI18 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Loss of CREBBP and KMT2D cooperate to accelerate lymphomagenesis and shape the lymphoma immune microenvironment.
Nature communications · 2024
CEChristopher E Mason CCChristopher ChinJLJie LiCMCem Meydan+5 more →AMAri M. Melnick
PMID: 38570506PMCID: PMC10991284DOI29 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Landscape of global urban environmental resistome and its association with local socioeconomic and medical status.
Science China. Life sciences · 2024
CEChristopher E MasonMAMaria A Sierra
PMID: 38489008DOI10 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
SMARCA4 is a haploinsufficient B cell lymphoma tumor suppressor that fine-tunes centrocyte cell fate decisions.
Cancer cell · 2024
CEChristopher E Mason CCChristopher Chin CMCem MeydanMTMatthew TeaterDBDarko Barisic+2 more →
PMID: 38458188PMCID: PMC11003852DOI32 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
ARID1A orchestrates SWI/SNF-mediated sequential binding of transcription factors with ARID1A loss driving pre-memory B cell fate and lymphomagenesis.
Cancer cell · 2024
CEChristopher E Mason CCChristopher Chin DBDarko Barisic CMCem Meydan+8 more →AMAri M. Melnick
PMID: 38458187PMCID: PMC11407687DOI44 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
ARID1A orchestrates SWI/SNF-mediated sequential binding of transcription factors with ARID1A loss driving pre-memory B cell fate and lymphomagenesis.
Cancer cell · 2024
CEChristopher E MasonCDCeyda DurmazDBDarko Barisic CCChristopher Chin+8 more →AMAri M. Melnick
PMID: 38458187PMCID: PMC11407687DOI44 citations
With Ceyda Durmaz · Physiology, Biophysics & Systems Biology (PhD) · Class of 2026
A case for the moral duty of specific human germline genetic engineering
International Journal of Astrobiology · 2024
Source: ScopusDOI
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Viral activation and ecological restructuring characterize a microbiome axis of spaceflight-associated immune activation.
Research square · 2023
CEChristopher E MasonBTBraden T TierneyEOEliah OverbeyMSMaria SierraCBChandrima Bhattacharya+5 more →
PMID: 37886447PMCID: PMC10602132DOI
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Viral activation and ecological restructuring characterize a microbiome axis of spaceflight-associated immune activation.
Research square · 2023
PMID: 37886447PMCID: PMC10602132DOI
With Nadia Houerbi · Physiology, Biophysics & Systems Biology (PhD)
Viral activation and ecological restructuring characterize a microbiome axis of spaceflight-associated immune activation.
Research square · 2023
CEChristopher E MasonJGJuan Garcia-MedinaBTBraden T TierneyEOEliah OverbeyMSMaria Sierra+5 more →
PMID: 37886447PMCID: PMC10602132DOI
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
Intra-host variation in the spike S1/S2 region of a feline coronavirus type-1 in a cat with persistent infection.
bioRxiv : the preprint server for biology · 2023
CEChristopher E MasonMSMaria Sierra Garcia
PMID: 37577589PMCID: PMC10418068DOI
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Evaluation of rRNA depletion methods for capturing the RNA virome from environmental surfaces.
BMC research notes · 2023
CEChristopher E MasonMAMaria A Sierra
PMID: 37420286PMCID: PMC10326927DOI2 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Collection of Biospecimens from the Inspiration4 Mission Establishes the Standards for the Space Omics and Medical Atlas (SOMA).
bioRxiv : the preprint server for biology · 2023
CEChristopher E MasonJGJuan Garcia-MedinaEOEliah Overbey JKJangKeun KimBTBraden Tierney+5 more →
PMID: 37205403PMCID: PMC10187258DOI361 citations
With Juan Garcia-Medina · Physiology, Biophysics & Systems Biology (PhD)
Collection of Biospecimens from the Inspiration4 Mission Establishes the Standards for the Space Omics and Medical Atlas (SOMA).
bioRxiv : the preprint server for biology · 2023
CEChristopher E MasonLILucinda InnesEOEliah Overbey JKJangKeun KimBTBraden Tierney+5 more →
PMID: 37205403PMCID: PMC10187258DOI361 citations
With Lucinda Innes · Physiology, Biophysics & Systems Biology (PhD)
Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B cell fate decisions and yields T cell-depleted lymphomas.
bioRxiv : the preprint server for biology · 2023
CEChristopher E Mason CCChristopher Chin CMCem MeydanMRMatthew R Teater+3 more →AMAri M. Melnick
PMID: 36824887PMCID: PMC9949106DOI
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
An Aged/Autoimmune B-cell Program Defines the Early Transformation of Extranodal Lymphomas.
Cancer discovery · 2023
CEChristopher E Mason CCChristopher ChinBWBenedikt W PelzerMXMin Xia+6 more →AMAri M. Melnick
PMID: 36264161PMCID: PMC9839622DOI20 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Ozone Disinfection for Elimination of Bacteria and Degradation of SARS-CoV2 RNA for Medical Environments.
Genes · 2022
CEChristopher E MasonCWCraig Westover
PMID: 36672826PMCID: PMC9858956DOI18 citations
With Craig Westover · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Microbiome and metagenomic analysis of Lake Hillier Australia reveals pigment-rich polyextremophiles and wide-ranging metabolic adaptations.
Environmental microbiome · 2022
CEChristopher E MasonMAMaria A SierraBTBraden T TierneyCBChandrima Bhattacharya
PMID: 36544228PMCID: PMC9768965DOI19 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
SETD2 Haploinsufficiency Enhances Germinal Center-Associated AICDA Somatic Hypermutation to Drive B-cell Lymphomagenesis.
Cancer discovery · 2022
CEChristopher E MasonCDCeyda DurmazMTMatt TeaterCMCem Meydan+2 more →AMAri M. Melnick
PMID: 35443279PMCID: PMC9262862DOI31 citations
With Ceyda Durmaz · Physiology, Biophysics & Systems Biology (PhD) · Class of 2026
System-wide transcriptome damage and tissue identity loss in COVID-19 patients.
Cell reports. Medicine · 2022
CEChristopher E MasonDCDavid C DankoJPJiwoon ParkAFAndré F RendeiroPVPriya Velu+12 more →
PMID: 35233546PMCID: PMC8784611DOI34 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Genomic Characterization of the Titan-like Cell Producing Naganishia tulchinskyi, the First Novel Eukaryote Isolated from the International Space Station.
Journal of fungi (Basel, Switzerland) · 2022
CEChristopher E MasonMSMaria Sierra Garcia
PMID: 35205919PMCID: PMC8875396DOI15 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Annotating unknown species of urban microorganisms on a global scale unveils novel functional diversity and local environment association.
Environmental research · 2021
CEChristopher E MasonDDDavid Danko
PMID: 34637759DOI14 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Cohesin Core Complex Gene Dosage Contributes to Germinal Center Derived Lymphoma Phenotypes and Outcomes.
Frontiers in immunology · 2021
CEChristopher E Mason CCChristopher ChinCDCeyda DurmazZCZhengming Chen+1 more →AMAri M. Melnick
PMID: 34621263PMCID: PMC8490713DOI9 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Cohesin Core Complex Gene Dosage Contributes to Germinal Center Derived Lymphoma Phenotypes and Outcomes.
Frontiers in immunology · 2021
CEChristopher E MasonCDCeyda DurmazCCChristopher Chin ZCZhengming Chen+1 more →AMAri M. Melnick
PMID: 34621263PMCID: PMC8490713DOI9 citations
With Ceyda Durmaz · Physiology, Biophysics & Systems Biology (PhD) · Class of 2026
Characterization of Spacesuit Associated Microbial Communities and Their Implications for NASA Missions.
Frontiers in microbiology · 2021
CEChristopher E MasonDDDavid DankoMSMaria Sierra Garcia
PMID: 34394013PMCID: PMC8358432DOI15 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Characterization of Spacesuit Associated Microbial Communities and Their Implications for NASA Missions.
Frontiers in microbiology · 2021
CEChristopher E MasonMSMaria Sierra GarciaDDDavid Danko
PMID: 34394013PMCID: PMC8358432DOI15 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Sequencing of Circulating Microbial Cell-Free DNA Can Identify Pathogens in Periprosthetic Joint Infections.
The Journal of bone and joint surgery. American volume · 2021
CEChristopher E MasonDCDavid C DankoAVAlberto Vittorio Carli PKPeter Keyes Sculco+11 more →LTLaura Theresa Donlin
PMID: 34293751DOI32 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Haplotype diversity and sequence heterogeneity of human telomeres.
Genome research · 2021
CEChristopher E MasonKGKirill GrigorevJRJake ReedCMCem Meydan
PMID: 34162698PMCID: PMC8256856DOI34 citations
With Kirill Grigorev · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
A global metagenomic map of urban microbiomes and antimicrobial resistance.
Cell · 2021
CEChristopher E MasonDDDavid DankoCBChandrima BhattacharyaKKKaterina KuchinLMLauren Mak+5 more →
PMID: 34043940PMCID: PMC8238498DOI308 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
A global metagenomic map of urban microbiomes and antimicrobial resistance.
Cell · 2021
CEChristopher E MasonMSMaria Sierra GarciaDDDavid DankoCBChandrima BhattacharyaKKKaterina Kuchin+5 more →
PMID: 34043940PMCID: PMC8238498DOI308 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Characterization of the public transit air microbiome and resistome reveals geographical specificity.
Microbiome · 2021
CEChristopher E MasonDCD C Danko
PMID: 34039416PMCID: PMC8157753DOI67 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions.
Genome biology · 2021
CEChristopher E Mason CCChristopher Chin
PMID: 33863344PMCID: PMC8051090DOI31 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
A comprehensive metagenomics framework to characterize organisms relevant for planetary protection.
Microbiome · 2021
CEChristopher E MasonDCDavid C DankoMSMaria Sierra GarciaKKKaterina KuchinDMDmitry Meleshko+1 more →
PMID: 33795001PMCID: PMC8016160DOI23 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
A comprehensive metagenomics framework to characterize organisms relevant for planetary protection.
Microbiome · 2021
CEChristopher E MasonMSMaria Sierra GarciaDCDavid C DankoKKKaterina KuchinDMDmitry Meleshko+1 more →
PMID: 33795001PMCID: PMC8016160DOI23 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Author Correction: Obesity and ethnicity alter gene expression in skin.
Scientific reports · 2021
CEChristopher E MasonDDDavid DankoJGJames Glenn Krueger
PMID: 33790371PMCID: PMC8012637DOI
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Origin Sample Prediction and Spatial Modeling of Antimicrobial Resistance in Metagenomic Sequencing Data.
Frontiers in genetics · 2021
CEChristopher E MasonDDDavid Danko
PMID: 33763122PMCID: PMC7983949DOI10 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps.
bioRxiv : the preprint server for biology · 2021
CEChristopher E MasonDDDavid DankoJPJiwoon ParkACArryn CraneyPVPriya Velu+13 more →
PMID: 33758858PMCID: PMC7987017DOI
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.
Nature communications · 2021
CEChristopher E MasonDDDavid DankoCMCem MeydanNANikolay A IvanovMSMaria Sierra Garcia+23 more →
PMID: 33712587PMCID: PMC7954844DOI107 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.
Nature communications · 2021
CEChristopher E MasonMSMaria Sierra GarciaCMCem MeydanDDDavid DankoNANikolay A Ivanov+23 more →
PMID: 33712587PMCID: PMC7954844DOI107 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.
Nature communications · 2021
CEChristopher E MasonCDCraig D WestoverCMCem MeydanDDDavid DankoNANikolay A Ivanov+23 more →
PMID: 33712587PMCID: PMC7954844DOI107 citations
With Craig Westover · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Clonal hematopoiesis before, during, and after human spaceflight.
Cell reports · 2021
CEChristopher E Mason CCChristopher Chin NMNuria Mencia Trinchant CMCem MeydanNANicholas A Vernice+4 more →
PMID: 33567281DOI7 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Chemotherapy Induces Senescence-Like Resilient Cells Capable of Initiating AML Recurrence.
Cancer discovery · 2021
CEChristopher E Mason CCChristopher Chin MLMeng LiMTMatt Teater+3 more →AMAri M. Melnick
PMID: 33500244PMCID: PMC8178167DOI214 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Chemotherapy Induces Senescence-Like Resilient Cells Capable of Initiating AML Recurrence.
Cancer discovery · 2021
CEChristopher E MasonCDCeyda DurmazMLMeng LiMTMatt Teater+3 more →AMAri M. Melnick
PMID: 33500244PMCID: PMC8178167DOI214 citations
With Ceyda Durmaz · Physiology, Biophysics & Systems Biology (PhD) · Class of 2026
Smc3 dosage regulates B cell transit through germinal centers and restricts their malignant transformation.
Nature immunology · 2021
CEChristopher E Mason CCChristopher Chin CMCem MeydanMRMatt R Teater+6 more →AMAri M. Melnick
PMID: 33432228PMCID: PMC7855695DOI33 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Cell-free DNA (cfDNA) and Exosome Profiling from a Year-Long Human Spaceflight Reveals Circulating Biomarkers.
iScience · 2020
CEChristopher E MasonMMMatthew MacKayKGKirill GrigorevCMCem MeydanFAFanny A Pelissier Vatter+10 more →
PMID: 33376973PMCID: PMC7756145DOI50 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Cell-free DNA (cfDNA) and Exosome Profiling from a Year-Long Human Spaceflight Reveals Circulating Biomarkers.
iScience · 2020
CEChristopher E MasonKGKirill GrigorevCMCem MeydanFAFanny A Pelissier VatterMCMichele Cioffi+10 more →
PMID: 33376973PMCID: PMC7756145DOI50 citations
With Kirill Grigorev · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Cell-free DNA (cfDNA) and Exosome Profiling from a Year-Long Human Spaceflight Reveals Circulating Biomarkers.
iScience · 2020
CEChristopher E MasonCWCraig WestoverKGKirill GrigorevCMCem MeydanFAFanny A Pelissier Vatter+10 more →
PMID: 33376973PMCID: PMC7756145DOI50 citations
With Craig Westover · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Histone H1 loss drives lymphoma by disrupting 3D chromatin architecture.
Nature · 2020
CEChristopher E Mason CCChristopher ChinNYNevin YusufovaMTMatt Teater+9 more →AMAri M. Melnick
PMID: 33299181PMCID: PMC7855728DOI204 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact.
Cell · 2020
CEChristopher E MasonMMMatthew MacKaySBSara Brin RosenthalCMCem MeydanJFJonathan Foox
PMID: 33242417PMCID: PMC7870178DOI338 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Fundamental Biological Features of Spaceflight: Advancing the Field to Enable Deep-Space Exploration.
Cell · 2020
CEChristopher E MasonMJMatthew J MacKayDCDuane C Hassane CMCem MeydanJFJonathan Foox
PMID: 33242416PMCID: PMC8441988DOI392 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Temporal Telomere and DNA Damage Responses in the Space Radiation Environment.
Cell reports · 2020
CEChristopher E MasonMJMatthew J MackayJFJonathan FooxKGKirill GrigorevCMCem Meydan
PMID: 33242411DOI88 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Temporal Telomere and DNA Damage Responses in the Space Radiation Environment.
Cell reports · 2020
CEChristopher E MasonKGKirill GrigorevMJMatthew J MackayJFJonathan FooxCMCem Meydan
PMID: 33242411DOI88 citations
With Kirill Grigorev · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development.
Cell reports · 2020
CEChristopher E Mason CCChristopher ChinCDCeyda DurmazMMMatthew MacKayAMAri M. Melnick+1 more →
PMID: 33242410PMCID: PMC8441986DOI70 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development.
Cell reports · 2020
CEChristopher E MasonMMMatthew MacKayCCChristopher ChinCDCeyda DurmazAMAri M. Melnick+1 more →
PMID: 33242410PMCID: PMC8441986DOI70 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development.
Cell reports · 2020
CEChristopher E MasonCDCeyda DurmazCCChristopher ChinMMMatthew MacKayAMAri M. Melnick+1 more →
PMID: 33242410PMCID: PMC8441986DOI70 citations
With Ceyda Durmaz · Physiology, Biophysics & Systems Biology (PhD) · Class of 2026
Multi-omic, Single-Cell, and Biochemical Profiles of Astronauts Guide Pharmacological Strategies for Returning to Gravity.
Cell reports · 2020
CEChristopher E Mason CCChristopher ChinMLMonica L GertzDTDelia TomoiagaMMMatthew MacKay+2 more →
PMID: 33242408PMCID: PMC9444344DOI75 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Multi-omic, Single-Cell, and Biochemical Profiles of Astronauts Guide Pharmacological Strategies for Returning to Gravity.
Cell reports · 2020
CEChristopher E MasonMMMatthew MacKayMLMonica L GertzCCChristopher ChinDTDelia Tomoiaga+2 more →
PMID: 33242408PMCID: PMC9444344DOI75 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Multi-omic, Single-Cell, and Biochemical Profiles of Astronauts Guide Pharmacological Strategies for Returning to Gravity.
Cell reports · 2020
CEChristopher E MasonDTDelia TomoiagaMLMonica L GertzCCChristopher ChinMMMatthew MacKay+2 more →
PMID: 33242408PMCID: PMC9444344DOI75 citations
With Delia Tomoiaga · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Telomere Length Dynamics and DNA Damage Responses Associated with Long-Duration Spaceflight.
Cell reports · 2020
CEChristopher E MasonMJMatthew J MackayCMCem Meydan
PMID: 33242406DOI88 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Clonal Hematopoiesis Before, During, and After Human Spaceflight.
Cell reports · 2020
CEChristopher E Mason CCChristopher Chin NMNuria Mencia TrinchantMJMatthew J MacKayJFJonathan Foox+6 more →
PMID: 33242405PMCID: PMC9398182DOI51 citations
With Christopher Chin · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2023
Clonal Hematopoiesis Before, During, and After Human Spaceflight.
Cell reports · 2020
CEChristopher E MasonMJMatthew J MacKayNMNuria Mencia Trinchant CCChristopher ChinJFJonathan Foox+6 more →
PMID: 33242405PMCID: PMC9398182DOI51 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Advancing the Integration of Biosciences Data Sharing to Further Enable Space Exploration.
Cell reports · 2020
CEChristopher E MasonKGKirill Grigorev
PMID: 33242404DOI30 citations
With Kirill Grigorev · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Efficacy of Daily Intake of Dried Cranberry 500 mg in Women with Overactive Bladder: A Randomized, Double-Blind, Placebo Controlled Study.
The Journal of urology · 2020
CEChristopher E MasonDDDavid DankoAEAndrew EidelbergBCBilal Chughtai
PMID: 32945735PMCID: PMC8299659DOI5 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Obesity and ethnicity alter gene expression in skin.
Scientific reports · 2020
CEChristopher E MasonDDDavid DankoJGJames Glenn Krueger
PMID: 32826922PMCID: PMC7442822DOI22 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
The COVID-19 XPRIZE and the need for scalable, fast, and widespread testing.
Nature biotechnology · 2020
CEChristopher E MasonMJMatthew J MacKay
PMID: 32820257PMCID: PMC7543743DOI63 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Identification of Radioresponsive Genes in Esophageal Cancer from Longitudinal and Single Cell Exome Sequencing.
International journal of radiation oncology, biology, physics · 2020
CEChristopher E MasonMMMatthew MacKayJFJonathan Foox
PMID: 32561500DOI15 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.
bioRxiv : the preprint server for biology · 2020
CEChristopher E MasonDDDavid DankoCMCem MeydanJFJonathan FooxMMMatthew MacKay+19 more →
PMID: 32511352PMCID: PMC7255793DOI
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.
bioRxiv : the preprint server for biology · 2020
CEChristopher E MasonMMMatthew MacKayCMCem MeydanDDDavid DankoJFJonathan Foox+19 more →
PMID: 32511352PMCID: PMC7255793DOI
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.
bioRxiv : the preprint server for biology · 2020
CEChristopher E MasonMSMaria Sierra GarciaCMCem MeydanDDDavid DankoJFJonathan Foox+19 more →
PMID: 32511352PMCID: PMC7255793DOI
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.
bioRxiv : the preprint server for biology · 2020
CEChristopher E MasonCDCraig D WestoverCMCem MeydanDDDavid DankoJFJonathan Foox+19 more →
PMID: 32511352PMCID: PMC7255793DOI
With Craig Westover · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
A synthesis of bacterial and archaeal phenotypic trait data.
Scientific data · 2020
CEChristopher E MasonDDDavid DankoHSHeba ShaabanDADavid A Westfall
PMID: 32503990PMCID: PMC7275036DOI108 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Illuminating Genetic Mysteries of the Dead Sea Scrolls.
Cell · 2020
CEChristopher E MasonDDDavid DankoJFJonathan Foox
PMID: 32492404DOI29 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Limits in the detection of m⁶A changes using MeRIP/m⁶A-seq.
Scientific reports · 2020
CEChristopher E MasonABAlexa B R McIntyreLCLeandro CerchiettiSRSamie R Jaffrey
PMID: 32313079PMCID: PMC7170965DOI206 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
The Microbiomes of Seven Lichen Genera Reveal Host Specificity, a Reduced Core Community and Potential as Source of Antimicrobials.
Frontiers in microbiology · 2020
CEChristopher E MasonDCDavid C DankoMSMaria Sierra GarciaTATito A Sandoval
PMID: 32265864PMCID: PMC7105886DOI47 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
The Microbiomes of Seven Lichen Genera Reveal Host Specificity, a Reduced Core Community and Potential as Source of Antimicrobials.
Frontiers in microbiology · 2020
CEChristopher E MasonMSMaria Sierra GarciaDCDavid C DankoTATito A Sandoval
PMID: 32265864PMCID: PMC7105886DOI47 citations
With Maria Sierra Garcia · Tri-I Program in Computational Biology & Medicine (PhD)
Loss of CHD1 Promotes Heterogeneous Mechanisms of Resistance to AR-Targeted Therapy via Chromatin Dysregulation.
Cancer cell · 2020
CEChristopher E MasonSLSheng LiYSYoung Sun LeeKNKristina NavrazhinaZCZhen Cao+3 more →
PMID: 32220301PMCID: PMC7292228DOI146 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Single-cell sperm transcriptomes and variants from fathers of children with and without autism spectrum disorder.
NPJ genomic medicine · 2020
CEChristopher E MasonDTDelia TomoiagaVAVanessa Aguiar-Pulido
PMID: 32133155PMCID: PMC7035312DOI15 citations
With Delia Tomoiaga · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
The therapeutic landscape for cells engineered with chimeric antigen receptors.
Nature biotechnology · 2020
CEChristopher E MasonMMMatthew MacKayJRJonathan RubGJGail J Roboz MLMonica L Guzman+1 more →
PMID: 31907405DOI212 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Translating current biomedical therapies for long duration, deep space missions.
Precision clinical medicine · 2019
CEChristopher E MasonMMMatthew MacKaySISonia IosimCWCraig Westover
PMID: 31886035PMCID: PMC6927098DOI34 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Translating current biomedical therapies for long duration, deep space missions.
Precision clinical medicine · 2019
CEChristopher E MasonCWCraig WestoverSISonia IosimMMMatthew MacKay
PMID: 31886035PMCID: PMC6927098DOI34 citations
With Craig Westover · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Altered m⁶A Modification of Specific Cellular Transcripts Affects Flaviviridae Infection.
Molecular cell · 2019
CEChristopher E MasonABAlexa B R McIntyre
PMID: 31810760PMCID: PMC7007864DOI159 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
Pre- and peri-implantation Zika virus infection impairs fetal development by targeting trophectoderm cells.
Nature communications · 2019
CEChristopher E MasonDTDelia TomoiagaLTLei TanLLLauretta Lacko+5 more →SCShuibing Chen
PMID: 31519912PMCID: PMC6744420DOI34 citations
With Delia Tomoiaga · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight.
Science (New York, N.Y.) · 2019
CEChristopher E MasonMMMatthew MacKayFEFrancine E Garrett-BakelmanCMCem MeydanAMAugustine M K Choi+2 more →
PMID: 30975860PMCID: PMC7580864DOI1,000 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Correction to: Comprehensive benchmarking and ensemble approaches for metagenomic classifiers.
Genome biology · 2019
CEChristopher E MasonDDDavid DankoABAlexa B R McIntyreJFJonathan Foox
PMID: 30953547PMCID: PMC6450011DOI2 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Correction to: Comprehensive benchmarking and ensemble approaches for metagenomic classifiers.
Genome biology · 2019
CEChristopher E MasonABAlexa B R McIntyreDDDavid DankoJFJonathan Foox
PMID: 30953547PMCID: PMC6450011DOI2 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
The Impact of Heterogeneity on Single-Cell Sequencing.
Frontiers in genetics · 2019
CEChristopher E MasonMMMatthew MacKayAMAri M. Melnick
PMID: 30881372PMCID: PMC6405636DOI104 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Single-molecule sequencing detection of N6-methyladenine in microbial reference materials.
Nature communications · 2019
CEChristopher E MasonABAlexa B R McIntyreKGKirill Grigorev
PMID: 30718479PMCID: PMC6362088DOI148 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
Single-molecule sequencing detection of N6-methyladenine in microbial reference materials.
Nature communications · 2019
CEChristopher E MasonKGKirill GrigorevABAlexa B R McIntyre
PMID: 30718479PMCID: PMC6362088DOI148 citations
With Kirill Grigorev · Physiology, Biophysics & Systems Biology (PhD) · Class of 2023
Minerva: an alignment- and reference-free approach to deconvolve Linked-Reads for metagenomics.
Genome research · 2018
CEChristopher E MasonDCDavid C DankoDMDmitry MeleshkoIHIman Hajirasouliha
PMID: 30523036PMCID: PMC6314158DOI14 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
N6-methyladenosine modification of hepatitis B virus RNA differentially regulates the viral life cycle.
Proceedings of the National Academy of Sciences of the United States of America · 2018
CEChristopher E MasonABAlexa B R McIntyre
PMID: 30104368PMCID: PMC6126736DOI217 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
Ontogeny and Biology of Human Small Airway Epithelial Club Cells.
American journal of respiratory and critical care medicine · 2018
CEChristopher E MasonSLSheng LiWZWu-Lin ZuoSLSarah L O'Beirne+5 more →RGRonald G Crystal
PMID: 29874100PMCID: PMC6290945DOI97 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
The Microbe Directory: An annotated, searchable inventory of microbes' characteristics.
Gates open research · 2018
CEChristopher E MasonDDDavid DankoHSHeba ShaabanDADavid A Westfall
PMID: 29630066PMCID: PMC5883067DOI16 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Jak1 Integrates Cytokine Sensing to Regulate Hematopoietic Stem Cell Function and Stress Hematopoiesis.
Cell stem cell · 2018
CEChristopher E MasonSLSheng LiRLRoss L. Levine
PMID: 29395057PMCID: PMC6260818DOI5 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Nanopore DNA Sequencing and Genome Assembly on the International Space Station.
Scientific reports · 2017
CEChristopher E MasonABAlexa B R McIntyreSFScot Federman
PMID: 29269933PMCID: PMC5740133DOI301 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
Jak1 Integrates Cytokine Sensing to Regulate Hematopoietic Stem Cell Function and Stress Hematopoiesis.
Cell stem cell · 2017
CEChristopher E MasonSLSheng LiMHMatthew H SpitzerLDLauren DongRLRoss L. Levine
PMID: 28965767PMCID: PMC5847260DOI65 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Comprehensive benchmarking and ensemble approaches for metagenomic classifiers.
Genome biology · 2017
CEChristopher E MasonDDDavid DankoABAlexa B R McIntyreJFJonathan Foox
PMID: 28934964PMCID: PMC5609029DOI245 citations
With David Danko · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2021
Comprehensive benchmarking and ensemble approaches for metagenomic classifiers.
Genome biology · 2017
CEChristopher E MasonABAlexa B R McIntyreDDDavid DankoJFJonathan Foox
PMID: 28934964PMCID: PMC5609029DOI245 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
The N⁶-methyladenosine (m⁶A)-forming enzyme METTL3 controls myeloid differentiation of normal hematopoietic and leukemia cells.
Nature medicine · 2017
CEChristopher E MasonMMMatthew MacKayBFBrian F PickeringSZSara Zaccara+4 more →MGMichael G Kharas
PMID: 28920958PMCID: PMC5677536DOI1,090 citations
With Matthew MacKay · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2020
Genetic and epigenetic heterogeneity and the impact on cancer relapse.
Experimental hematology · 2017
CEChristopher E MasonSLSheng Li
PMID: 28705639PMCID: PMC5651672DOI27 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
Journal of biomolecular techniques : JBT · 2017
CEChristopher E MasonAMAlexa McIntyreJFJonathan Foox
PMID: 28337070PMCID: PMC5345951DOI54 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
Nanopore sequencing in microgravity.
NPJ microgravity · 2016
CEChristopher E MasonABAlexa B R McIntyre
PMID: 28725742PMCID: PMC5515536DOI71 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection.
Cell host & microbe · 2016
CEChristopher E MasonABAlexa B R McIntyre
PMID: 27773535PMCID: PMC5123813DOI427 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
Erratum to: A benchmark for RNA-seq quantification pipelines.
Genome biology · 2016
CEChristopher E MasonSLSheng Li
PMID: 27716375PMCID: PMC5045616DOI10 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Clinical Genomics: Challenges and Opportunities.
Critical reviews in eukaryotic gene expression · 2016
CEChristopher E MasonSLSheng LiABAlexa B R McIntyreJPJeffrey P. Greenfield
PMID: 27480773PMCID: PMC5470591DOI15 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Clinical Genomics: Challenges and Opportunities.
Critical reviews in eukaryotic gene expression · 2016
CEChristopher E MasonABAlexa B R McIntyreJPJeffrey P. GreenfieldSLSheng Li
PMID: 27480773PMCID: PMC5470591DOI15 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
Distinct evolution and dynamics of epigenetic and genetic heterogeneity in acute myeloid leukemia.
Nature medicine · 2016
CEChristopher E MasonSLSheng LiFEFrancine E Garrett-BakelmanSSStephen S ChungMLMonica L Guzman+5 more →
PMID: 27322744PMCID: PMC4938719DOI330 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Extensive sequencing of seven human genomes to characterize benchmark reference materials.
Scientific data · 2016
CEChristopher E MasonABAlexa B R McIntyreHSHeather S Ordonez
PMID: 27271295PMCID: PMC4896128DOI529 citations
With Alexa McIntyre · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2019
Erratum to: A benchmark for RNA-seq quantification pipelines.
Genome biology · 2016
CEChristopher E MasonSLSheng Li
PMID: 27215799PMCID: PMC4877800DOI2 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Genetic and epigenetic heterogeneity in acute myeloid leukemia.
Current opinion in genetics & development · 2016
CEChristopher E MasonSLSheng LiAMAri M. Melnick
PMID: 27162099PMCID: PMC4903929DOI114 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
A benchmark for RNA-seq quantification pipelines.
Genome biology · 2016
CEChristopher E MasonSLSheng Li
PMID: 27107712PMCID: PMC4842274DOI138 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Dynamic evolution of clonal epialleles revealed by methclone.
Genome biology · 2014
CEChristopher E MasonSLSheng LiFGFrancine Garrett-BakelmanCZChao ZhangMEMargaret Elizabeth Ross+2 more →
PMID: 25260792PMCID: PMC4242486DOI59 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures.
Nature communications · 2014
CEChristopher E MasonSLSheng Li
PMID: 25254650DOI101 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Detecting and correcting systematic variation in large-scale RNA sequencing data.
Nature biotechnology · 2014
CEChristopher E MasonSLSheng LiPZPaul Zumbo
PMID: 25150837PMCID: PMC4160374DOI150 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.
Nature biotechnology · 2014
CEChristopher E MasonSLSheng LiSCSagar ChhangawalaPZPaul Zumbo
PMID: 25150835PMCID: PMC4167418DOI189 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
The pivotal regulatory landscape of RNA modifications.
Annual review of genomics and human genetics · 2014
CEChristopher E MasonSLSheng Li
PMID: 24898039DOI301 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Deletion of Asxl1 results in myelodysplasia and severe developmental defects in vivo.
The Journal of experimental medicine · 2013
CEChristopher E MasonSLSheng LiOAOmar Abdel-wahabAHAlan H Shih+3 more →RLRoss L. Levine
PMID: 24218140PMCID: PMC3832937DOI296 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Systematic evaluation of spliced alignment programs for RNA-seq data.
Nature methods · 2013
PMID: 24185836PMCID: PMC4018468DOI403 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Identification of kinase fusion oncogenes in post-Chernobyl radiation-induced thyroid cancers.
The Journal of clinical investigation · 2013
CEChristopher E MasonSLSheng LiFVFrancesca Voza
PMID: 24135138PMCID: PMC3809792DOI229 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
An optimized algorithm for detecting and annotating regional differential methylation.
BMC bioinformatics · 2013
CEChristopher E MasonSLSheng LiFEFrancine E Garrett-BakelmanPZPaul Zumbo RLRoss L. Levine+1 more →
PMID: 23735126PMCID: PMC3622633DOI105 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Relapse-specific mutations in NT5C2 in childhood acute lymphoblastic leukemia.
Nature genetics · 2013
CEChristopher E MasonSLSheng LiJAJulia A MeyerPZPaul Zumbo RLRoss L. Levine
PMID: 23377183PMCID: PMC3681285DOI260 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics.
Nucleic acids research · 2012
CEChristopher E MasonSLSheng LiMBMarjan BozinoskiPZPaul Zumbo
PMID: 23203872PMCID: PMC3531109DOI64 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
The birth of the Epitranscriptome: deciphering the function of RNA modifications.
Genome biology · 2012
CEChristopher E MasonYSYogesh SaletoreSRSamie R Jaffrey
PMID: 23113984PMCID: PMC3491402DOI422 citations
With Yogesh Saletore · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2015
methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles.
Genome biology · 2012
CEChristopher E MasonSLSheng LiFEFrancine E Garrett-BakelmanMEMaria E FigueroaAMAri M. Melnick
PMID: 23034086PMCID: PMC3491415DOI1,738 citations
With Sheng Li · Physiology, Biophysics & Systems Biology (PhD) · Class of 2015
Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.
Cell · 2012
CEChristopher E MasonYSYogesh SaletorePZPaul Zumbo OEOlivier Elemento SRSamie R Jaffrey
PMID: 22608085PMCID: PMC3383396DOI3,720 citations
With Yogesh Saletore · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2015
A genome sequence resource for the aye-aye (Daubentonia madagascariensis), a nocturnal lemur from Madagascar.
Genome biology and evolution · 2011
CEChristopher E MasonDRDarryl Reeves
PMID: 22155688PMCID: PMC3273163DOI57 citations
With Darryl Reeves · Tri-I Program in Computational Biology & Medicine (PhD) · Class of 2017

Postdoc mentee

Systemic elevation of gut derived p-cresol during one year in space: implications for brain, heart, bone, liver and microbiome in astronauts.
Frontiers in physiology · 2026
PMID: 42866036PMCID: PMC13655695DOI
With Eliah Overbey, PhD · Postdoc mentee
Spaceflight-guided pharmacogenomics: a foundational analysis of pharmaceuticals and their responsive gene targets in the space environment.
Frontiers in physiology · 2026
PMID: 42769202PMCID: PMC13590397DOI
With Eliah Overbey, PhD · Postdoc mentee
Long-term major histocompatibility complex class I suppression in astronauts and clinical implications.
Communications biology · 2026
CEChristopher E Mason RCRobert Chen JKJangKeun KimLILucinda InnesZFZachary Feinstein+1 more →
PMID: 42562863PMCID: PMC13448508DOI
With Robert Chen · Postdoc mentee
On the ancestry and evolution of the extinct dire wolf.
Cell genomics · 2026
CEChristopher E Mason ALAlexander Lucaci
PMID: 42508403PMCID: PMC13477035DOI
With Alexander Lucaci · Postdoc mentee
Diversity and distinctive characteristics of the global RNA virome in urban and peri-urban environments.
Nature communications · 2026
CEChristopher E Mason ALAlexander LucaciMAMaria A Sierra
PMID: 42463489PMCID: PMC13377081DOI
With Alexander Lucaci · Postdoc mentee
Spatial remodeling of bone marrow architecture defines tissue-state signatures of disease activity and therapeutic response in myelodysplastic neoplasms.
Leukemia · 2026
CEChristopher E Mason JPJiwoon Park RLRalph L Nachman AKAleksandra Kopacz+18 more →SPSanjay Patel
PMID: 42380663PMCID: PMC13421341DOI
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Shotgun metagenomic dataset of surface microbiomes at a train station in Shinagawa, Tokyo.
BMC genomic data · 2026
CEChristopher E Mason ALAlexander Lucaci
PMID: 42286497PMCID: PMC13488565DOI
With Alexander Lucaci · Postdoc mentee
Sustained Chlorination of Hospital Surfaces Restructures the Microbiome and Virome and Diversifies Resistance Genes.
Environmental science & technology · 2026
CEChristopher E Mason ALAlexander Lucaci
PMID: 42237904DOI
With Alexander Lucaci · Postdoc mentee
Towards a decentralized future for open-science databases.
Nature genetics · 2026
CEChristopher E Mason ALAlexander Lucaci
PMID: 42156561DOI1 citations
With Alexander Lucaci · Postdoc mentee
The Data Science of Health in Space.
Annual review of biomedical data science · 2026
CEChristopher E Mason JPJiwoon ParkJDJulian Daniel Sunday WillettJKJangKeun KimTMTheodore M Nelson
PMID: 42149965DOI
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Spatial transcriptomics atlas of inflammatory bowel disease to guide implementation in research consortiums and clinical trials.
Nature communications · 2026
CEChristopher E Mason JPJiwoon Park
PMID: 42049732PMCID: PMC13328602DOI3 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Diverse high-fat diets drive multi-omic reprogramming that persists after dietary reversal.
bioRxiv : the preprint server for biology · 2026
CEChristopher E Mason JPJiwoon ParkEOElif OzcelikCDCeyda DurmazTMTheodore M Nelson+2 more →
PMID: 41889866PMCID: PMC13015288DOI
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
CAMP: a modular metagenomics analysis system for integrated multistep data exploration.
NAR genomics and bioinformatics · 2026
CEChristopher E Mason ALAlexander LucaciLMLauren MakBTBraden Tierney+5 more →IHIman Hajirasouliha
PMID: 41551931PMCID: PMC12809600DOI
With Alexander Lucaci · Postdoc mentee
SARS-CoV-2 wastewater genomic surveillance: approaches, challenges, and opportunities.
Genome biology · 2026
CEChristopher E Mason ALAlexander LucaciBTBraden T Tierney
PMID: 41526978PMCID: PMC12794521DOI10 citations
With Alexander Lucaci · Postdoc mentee
Astronauts as a Human Aging Model: Epigenetic Age Responses to Space Exposure.
Aging cell · 2026
PMID: 41521572PMCID: PMC12791563DOI4 citations
With Eliah Overbey, PhD · Postdoc mentee
Proof-of-concept of host attribution of antimicrobial resistance genes using wastewater Hi-C metagenome sequencing.
Journal of water and health · 2025
CEChristopher E Mason ALAlexander Lucaci
PMID: 41764388DOI
With Alexander Lucaci · Postdoc mentee
Standardized metrics for assessment and reproducibility of imaging-based spatial transcriptomics datasets.
Nature biotechnology · 2025
CEChristopher E Mason JPJiwoon Park AAAlicia Alonso SLShauna Lee Houlihan RERobert E. Schwartz+1 more →
PMID: 41339526PMCID: PMC13368583DOI18 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Single-cell spatial mapping reveals dynamic bone marrow microarchitectural alterations and enhances clinical diagnostics in MDS.
bioRxiv : the preprint server for biology · 2025
CEChristopher E Mason JPJiwoon Park AKAleksandra KopaczCUCaitlin Unkenholz+13 more →SPSanjay Patel
PMID: 41279873PMCID: PMC12632391DOI
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Multi-Omics Profiling of Individuals Sustaining Extreme Physical Stressors.
Life (Basel, Switzerland) · 2025
CEChristopher E Mason JPJiwoon Park RCRobert ChenTMTheodore M Nelson
PMID: 41010319PMCID: PMC12471032DOI2 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Multi-Omics Profiling of Individuals Sustaining Extreme Physical Stressors.
Life (Basel, Switzerland) · 2025
CEChristopher E Mason RCRobert ChenTMTheodore M NelsonJPJiwoon Park
PMID: 41010319PMCID: PMC12471032DOI2 citations
With Robert Chen · Postdoc mentee
Global biogeography of airborne viruses in public transit systems and their host interactions.
Microbiome · 2025
CEChristopher E Mason ALAlexander LucaciDBDaniela BezdanDCDavid C DankoCMCem Meydan+1 more →
PMID: 40883783PMCID: PMC12395665DOI5 citations
With Alexander Lucaci · Postdoc mentee
Long term assessment of SARS-CoV-2 in wastewater and the transition to evaluate additional viral targets.
The Science of the total environment · 2025
CEChristopher E Mason ALAlexander Lucaci
PMID: 40712541PMCID: PMC12490206DOI5 citations
With Alexander Lucaci · Postdoc mentee
Feeding the cosmos: tackling personalized space nutrition and the leaky gut challenge.
NPJ microgravity · 2025
PMID: 40681523PMCID: PMC12274595DOI7 citations
With Eliah Overbey, PhD · Postdoc mentee
The Spatial Atlas of Human Anatomy (SAHA): A Multimodal Subcellular-Resolution Reference Across Human Organs.
bioRxiv : the preprint server for biology · 2025
CEChristopher E Mason JPJiwoon Park EPErika PatelEOElif OzcelikNBNicholas Bartelo+14 more →
PMID: 40611896PMCID: PMC12224548DOI
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Leveraging wastewater sequencing to strengthen global public health surveillance.
BMC global and public health · 2025
CEChristopher E Mason ALAlexander Lucaci
PMID: 40119458PMCID: PMC11927347DOI7 citations
With Alexander Lucaci · Postdoc mentee
CAMP: A modular metagenomics analysis system for integrated multi-step data exploration.
bioRxiv : the preprint server for biology · 2025
CEChristopher E Mason ALAlexander LucaciLMLauren MakBTBraden Tierney+5 more →IHIman Hajirasouliha
PMID: 37066359PMCID: PMC10104186DOI
With Alexander Lucaci · Postdoc mentee
Lethal COVID-19 associates with RAAS-induced inflammation for multiple organ damage including mediastinal lymph nodes.
Proceedings of the National Academy of Sciences of the United States of America · 2024
CEChristopher E Mason JPJiwoon Park ACAmy ChadburnABAlain BorczukSSSaloni Sinha+6 more →
PMID: 39602262PMCID: PMC11626201DOI21 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Towards geospatially-resolved public-health surveillance via wastewater sequencing.
Nature communications · 2024
CEChristopher E Mason ALAlexander LucaciBTBraden T TierneyJFJonathan FooxDBDaniel Butler+1 more →
PMID: 39333485PMCID: PMC11436780DOI23 citations
With Alexander Lucaci · Postdoc mentee
Distinct clinical outcomes and biological features of specific KRAS mutants in human pancreatic cancer.
Cancer cell · 2024
CEChristopher E Mason JPJiwoon ParkCACaitlin A McIntyreAGAdrien Grimont+16 more →RCRohit Chandwani
PMID: 39214094PMCID: PMC11419252DOI74 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Protective alleles and precision healthcare in crewed spaceflight.
Nature communications · 2024
PMID: 39039045PMCID: PMC11263583DOI15 citations
With Eliah Overbey, PhD · Postdoc mentee
Telomeric RNA (TERRA) increases in response to spaceflight and high-altitude climbing.
Communications biology · 2024
PMID: 38862827PMCID: PMC11167063DOI17 citations
With Eliah Overbey, PhD · Postdoc mentee
Transcriptomics analysis reveals molecular alterations underpinning spaceflight dermatology.
Communications medicine · 2024
CEChristopher E Mason JPJiwoon Park CMCem Meydan EOEliah Overbey CCChristopher Chin
PMID: 38862781PMCID: PMC11166967DOI8 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Transcriptomics analysis reveals molecular alterations underpinning spaceflight dermatology.
Communications medicine · 2024
PMID: 38862781PMCID: PMC11166967DOI11 citations
With Eliah Overbey, PhD · Postdoc mentee
Spaceflight induces changes in gene expression profiles linked to insulin and estrogen.
Communications biology · 2024
CEChristopher E Mason JPJiwoon Park JKJangKeun Kim EOEliah Overbey
PMID: 38862620PMCID: PMC11166981DOI31 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Spaceflight induces changes in gene expression profiles linked to insulin and estrogen.
Communications biology · 2024
PMID: 38862620PMCID: PMC11166981DOI32 citations
With Eliah Overbey, PhD · Postdoc mentee
Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight.
Nature microbiology · 2024
CEChristopher E Mason JPJiwoon ParkBTBraden T TierneyJKJangKeun Kim EOEliah Overbey+7 more →
PMID: 38862604PMCID: PMC11222149DOI68 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight.
Nature microbiology · 2024
PMID: 38862604PMCID: PMC11222149DOI76 citations
With Eliah Overbey, PhD · Postdoc mentee
Aging and putative frailty biomarkers are altered by spaceflight.
Scientific reports · 2024
PMID: 38862573PMCID: PMC11166946DOI27 citations
With Eliah Overbey, PhD · Postdoc mentee
Spatiotemporal expression and control of haemoglobin in space.
Nature communications · 2024
PMID: 38862545PMCID: PMC11166948DOI8 citations
With Eliah Overbey, PhD · Postdoc mentee
Space radiation damage rescued by inhibition of key spaceflight associated miRNAs.
Nature communications · 2024
CEChristopher E Mason JPJiwoon Park JKJangKeun Kim EOEliah Overbey CMCem Meydan+1 more →
PMID: 38862542PMCID: PMC11166944DOI22 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Space radiation damage rescued by inhibition of key spaceflight associated miRNAs.
Nature communications · 2024
PMID: 38862542PMCID: PMC11166944DOI27 citations
With Eliah Overbey, PhD · Postdoc mentee
Single-cell multi-ome and immune profiles of the Inspiration4 crew reveal conserved, cell-type, and sex-specific responses to spaceflight.
Nature communications · 2024
CEChristopher E Mason JPJiwoon Park JKJangKeun KimBTBraden T TierneyEOEliah Overbey+12 more →
PMID: 38862516PMCID: PMC11166952DOI66 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Single-cell multi-ome and immune profiles of the Inspiration4 crew reveal conserved, cell-type, and sex-specific responses to spaceflight.
Nature communications · 2024
PMID: 38862516PMCID: PMC11166952DOI72 citations
With Eliah Overbey, PhD · Postdoc mentee
Collection of biospecimens from the inspiration4 mission establishes the standards for the space omics and medical atlas (SOMA).
Nature communications · 2024
PMID: 38862509PMCID: PMC11166662DOI39 citations
With Eliah Overbey, PhD · Postdoc mentee
Direct RNA sequencing of astronaut blood reveals spaceflight-associated m6A increases and hematopoietic transcriptional responses.
Nature communications · 2024
PMID: 38862496PMCID: PMC11166648DOI27 citations
With Eliah Overbey, PhD · Postdoc mentee
Spatial multi-omics of human skin reveals KRAS and inflammatory responses to spaceflight.
Nature communications · 2024
CEChristopher E Mason JPJiwoon Park EOEliah OverbeyBTBraden T TierneyMMMatthew MacKay+2 more →
PMID: 38862494PMCID: PMC11166909DOI33 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Spatial multi-omics of human skin reveals KRAS and inflammatory responses to spaceflight.
Nature communications · 2024
PMID: 38862494PMCID: PMC11166909DOI37 citations
With Eliah Overbey, PhD · Postdoc mentee
Single-cell analysis identifies conserved features of immune dysfunction in simulated microgravity and spaceflight.
Nature communications · 2024
PMID: 38862487PMCID: PMC11166937DOI52 citations
With Eliah Overbey, PhD · Postdoc mentee
Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction.
Nature communications · 2024
PMID: 38862484PMCID: PMC11167060DOI56 citations
With Eliah Overbey, PhD · Postdoc mentee
Secretome profiling reveals acute changes in oxidative stress, brain homeostasis, and coagulation following short-duration spaceflight.
Nature communications · 2024
PMID: 38862464PMCID: PMC11166969DOI39 citations
With Eliah Overbey, PhD · Postdoc mentee
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E Mason JPJiwoon Park EOEliah Overbey JKJangKeun KimBTBraden T Tierney+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
PMID: 38862028PMCID: PMC11357981DOI112 citations
With Eliah Overbey, PhD · Postdoc mentee
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank.
Nature · 2024
CEChristopher E Mason ALAlexander Lucaci EOEliah Overbey JKJangKeun KimBTBraden T Tierney+25 more →
PMID: 38862028PMCID: PMC11357981DOI104 citations
With Alexander Lucaci · Postdoc mentee
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
CEChristopher E Mason JPJiwoon ParkMBMarissa BurkeCCChristopher ChinIDIwijn De Vlaminck+13 more →
PMID: 38862027PMCID: PMC12366838DOI56 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
PMID: 38862027PMCID: PMC12366838DOI64 citations
With Eliah Overbey, PhD · Postdoc mentee
A second space age spanning omics, platforms and medicine across orbits.
Nature · 2024
CEChristopher E Mason ALAlexander LucaciMBMarissa BurkeCCChristopher ChinIDIwijn De Vlaminck+13 more →
PMID: 38862027PMCID: PMC12366838DOI56 citations
With Alexander Lucaci · Postdoc mentee
Molecular and physiological changes in the SpaceX Inspiration4 civilian crew.
Nature · 2024
CEChristopher E Mason JPJiwoon Park EOEliah Overbey CMCem MeydanBTBraden Tierney+9 more →
PMID: 38862026PMCID: PMC11357997DOI52 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Molecular and physiological changes in the SpaceX Inspiration4 civilian crew.
Nature · 2024
PMID: 38862026PMCID: PMC11357997DOI59 citations
With Eliah Overbey, PhD · Postdoc mentee
Inspiration4 data access through the NASA Open Science Data Repository.
NPJ microgravity · 2024
PMID: 38744887PMCID: PMC11094041DOI6 citations
With Eliah Overbey, PhD · Postdoc mentee
Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight.
Precision clinical medicine · 2024
PMID: 38634106PMCID: PMC11022651DOI26 citations
With Eliah Overbey, PhD · Postdoc mentee
Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight.
Precision clinical medicine · 2024
CEChristopher E Mason ALAlexander LucaciJGJuan Garcia-MedinaKSKarolina SienkiewiczEOEliah Overbey+8 more →
PMID: 38634106PMCID: PMC11022651DOI25 citations
With Alexander Lucaci · Postdoc mentee
A comprehensive SARS-CoV-2 and COVID-19 review, Part 2: host extracellular to systemic effects of SARS-CoV-2 infection.
European journal of human genetics : EJHG · 2023
CEChristopher E Mason JPJiwoon Park RERobert E. Schwartz
PMID: 37938797PMCID: PMC10772081DOI49 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Viral activation and ecological restructuring characterize a microbiome axis of spaceflight-associated immune activation.
Research square · 2023
CEChristopher E Mason JPJiwoon ParkBTBraden T TierneyEOEliah OverbeyMSMaria Sierra+5 more →
PMID: 37886447PMCID: PMC10602132DOI
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Viral activation and ecological restructuring characterize a microbiome axis of spaceflight-associated immune activation.
Research square · 2023
PMID: 37886447PMCID: PMC10602132DOI
With Eliah Overbey, PhD · Postdoc mentee
Elevated A-to-I RNA editing in COVID-19 infected individuals.
NAR genomics and bioinformatics · 2023
CEChristopher E Mason JPJiwoon Park CMCem Meydan
PMID: 37859800PMCID: PMC10583280DOI14 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Collection of Biospecimens from the Inspiration4 Mission Establishes the Standards for the Space Omics and Medical Atlas (SOMA).
bioRxiv : the preprint server for biology · 2023
PMID: 37205403PMCID: PMC10187258DOI361 citations
With Eliah Overbey, PhD · Postdoc mentee
More than a Feeling: Dermatological Changes Impacted by Spaceflight.
Research square · 2023
CEChristopher E Mason JPJiwoon Park CMCem Meydan EOEliah Overbey JKJangKeun Kim
PMID: 36798347PMCID: PMC9934743DOI28,117 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
More than a Feeling: Dermatological Changes Impacted by Spaceflight.
Research square · 2023
PMID: 36798347PMCID: PMC9934743DOI28,117 citations
With Eliah Overbey, PhD · Postdoc mentee
Spatial omics technologies at multimodal and single cell/subcellular level.
Genome biology · 2022
CEChristopher E Mason JPJiwoon ParkJKJunbum KimCMCharles M. Rice OEOlivier Elemento
PMID: 36514162PMCID: PMC9746133DOI113 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Challenges and considerations for single-cell and spatially resolved transcriptomics sample collection during spaceflight.
Cell reports methods · 2022
CEChristopher E Mason JPJiwoon Park EOEliah OverbeyDCDawn Chirko
PMID: 36452864PMCID: PMC9701605DOI17 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Challenges and considerations for single-cell and spatially resolved transcriptomics sample collection during spaceflight.
Cell reports methods · 2022
PMID: 36452864PMCID: PMC9701605DOI21 citations
With Eliah Overbey, PhD · Postdoc mentee
IL-6/STAT3 axis dictates the PNPLA3-mediated susceptibility to non-alcoholic fatty liver disease.
Journal of hepatology · 2022
CEChristopher E Mason JPJiwoon Park CMCharles M. Rice
PMID: 36049612PMCID: PMC9772150DOI135 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
System-wide transcriptome damage and tissue identity loss in COVID-19 patients.
Cell reports. Medicine · 2022
CEChristopher E Mason JPJiwoon ParkDCDavid C DankoAFAndré F RendeiroPVPriya Velu+12 more →
PMID: 35233546PMCID: PMC8784611DOI34 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
The spatial landscape of lung pathology during COVID-19 progression.
Nature · 2021
CEChristopher E Mason JPJiwoon ParkAFAndré F RendeiroJKJunbum Kim+4 more →RERobert E. Schwartz
PMID: 33780969PMCID: PMC8204801DOI295 citations
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023
Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps.
bioRxiv : the preprint server for biology · 2021
CEChristopher E Mason JPJiwoon ParkDDDavid DankoACArryn CraneyPVPriya Velu+13 more →
PMID: 33758858PMCID: PMC7987017DOI
With Jiwoon Park · Physiology, Biophysics & Systems Biology · Class of 2023