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Christopher E Mason, PhD
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Co-authored with Sheng Li
Co-authored publications
Christopher E Mason, PhD and Sheng Li · 23 publications
CSV
Word
Loss of CHD1 Promotes Heterogeneous Mechanisms of Resistance to AR-Targeted Therapy via Chromatin Dysregulation.
Cancer cell
· 2020
CE
Christopher E Mason
SL
Sheng Li
YS
Young Sun Lee
KN
Kristina Navrazhina
ZC
Zhen Cao
+3 more →
PMID:
32220301
·
PMCID:
PMC7292228
·
DOI
·
146 citations
·
Abstract
Ontogeny and Biology of Human Small Airway Epithelial Club Cells.
American journal of respiratory and critical care medicine
· 2018
CE
Christopher E Mason
SL
Sheng Li
WZ
Wu-Lin Zuo
SL
Sarah L O'Beirne
+5 more →
RG
Ronald G Crystal
PMID:
29874100
·
PMCID:
PMC6290945
·
DOI
·
97 citations
·
Abstract
Jak1 Integrates Cytokine Sensing to Regulate Hematopoietic Stem Cell Function and Stress Hematopoiesis.
Cell stem cell
· 2018
CE
Christopher E Mason
SL
Sheng Li
RL
Ross L. Levine
PMID:
29395057
·
PMCID:
PMC6260818
·
DOI
·
5 citations
Jak1 Integrates Cytokine Sensing to Regulate Hematopoietic Stem Cell Function and Stress Hematopoiesis.
Cell stem cell
· 2017
CE
Christopher E Mason
SL
Sheng Li
MH
Matthew H Spitzer
LD
Lauren Dong
RL
Ross L. Levine
PMID:
28965767
·
PMCID:
PMC5847260
·
DOI
·
65 citations
·
Abstract
Genetic and epigenetic heterogeneity and the impact on cancer relapse.
Experimental hematology
· 2017
CE
Christopher E Mason
SL
Sheng Li
PMID:
28705639
·
PMCID:
PMC5651672
·
DOI
·
27 citations
·
Abstract
Erratum to: A benchmark for RNA-seq quantification pipelines.
Genome biology
· 2016
CE
Christopher E Mason
SL
Sheng Li
PMID:
27716375
·
PMCID:
PMC5045616
·
DOI
·
10 citations
Clinical Genomics: Challenges and Opportunities.
Critical reviews in eukaryotic gene expression
· 2016
CE
Christopher E Mason
SL
Sheng Li
AB
Alexa B R McIntyre
JP
Jeffrey P. Greenfield
PMID:
27480773
·
PMCID:
PMC5470591
·
DOI
·
15 citations
·
Abstract
Distinct evolution and dynamics of epigenetic and genetic heterogeneity in acute myeloid leukemia.
Nature medicine
· 2016
CE
Christopher E Mason
SL
Sheng Li
FE
Francine E Garrett-Bakelman
SS
Stephen S Chung
ML
Monica L Guzman
+5 more →
PMID:
27322744
·
PMCID:
PMC4938719
·
DOI
·
330 citations
·
Abstract
Erratum to: A benchmark for RNA-seq quantification pipelines.
Genome biology
· 2016
CE
Christopher E Mason
SL
Sheng Li
PMID:
27215799
·
PMCID:
PMC4877800
·
DOI
·
2 citations
Genetic and epigenetic heterogeneity in acute myeloid leukemia.
Current opinion in genetics & development
· 2016
CE
Christopher E Mason
SL
Sheng Li
AM
Ari M. Melnick
PMID:
27162099
·
PMCID:
PMC4903929
·
DOI
·
114 citations
·
Abstract
A benchmark for RNA-seq quantification pipelines.
Genome biology
· 2016
CE
Christopher E Mason
SL
Sheng Li
PMID:
27107712
·
PMCID:
PMC4842274
·
DOI
·
138 citations
·
Abstract
Dynamic evolution of clonal epialleles revealed by methclone.
Genome biology
· 2014
CE
Christopher E Mason
SL
Sheng Li
FG
Francine Garrett-Bakelman
CZ
Chao Zhang
ME
Margaret Elizabeth Ross
+2 more →
PMID:
25260792
·
PMCID:
PMC4242486
·
DOI
·
59 citations
·
Abstract
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures.
Nature communications
· 2014
CE
Christopher E Mason
SL
Sheng Li
PMID:
25254650
·
DOI
·
101 citations
·
Abstract
Detecting and correcting systematic variation in large-scale RNA sequencing data.
Nature biotechnology
· 2014
CE
Christopher E Mason
SL
Sheng Li
PZ
Paul Zumbo
PMID:
25150837
·
PMCID:
PMC4160374
·
DOI
·
150 citations
·
Abstract
Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.
Nature biotechnology
· 2014
CE
Christopher E Mason
SL
Sheng Li
SC
Sagar Chhangawala
PZ
Paul Zumbo
PMID:
25150835
·
PMCID:
PMC4167418
·
DOI
·
189 citations
·
Abstract
The pivotal regulatory landscape of RNA modifications.
Annual review of genomics and human genetics
· 2014
CE
Christopher E Mason
SL
Sheng Li
PMID:
24898039
·
DOI
·
301 citations
·
Abstract
Deletion of Asxl1 results in myelodysplasia and severe developmental defects in vivo.
The Journal of experimental medicine
· 2013
CE
Christopher E Mason
SL
Sheng Li
OA
Omar Abdel-wahab
AH
Alan H Shih
+3 more →
RL
Ross L. Levine
PMID:
24218140
·
PMCID:
PMC3832937
·
DOI
·
296 citations
·
Abstract
Systematic evaluation of spliced alignment programs for RNA-seq data.
Nature methods
· 2013
PMID:
24185836
·
PMCID:
PMC4018468
·
DOI
·
403 citations
·
Abstract
Identification of kinase fusion oncogenes in post-Chernobyl radiation-induced thyroid cancers.
The Journal of clinical investigation
· 2013
CE
Christopher E Mason
SL
Sheng Li
FV
Francesca Voza
PMID:
24135138
·
PMCID:
PMC3809792
·
DOI
·
229 citations
·
Abstract
An optimized algorithm for detecting and annotating regional differential methylation.
BMC bioinformatics
· 2013
CE
Christopher E Mason
SL
Sheng Li
FE
Francine E Garrett-Bakelman
PZ
Paul Zumbo
RL
Ross L. Levine
+1 more →
PMID:
23735126
·
PMCID:
PMC3622633
·
DOI
·
105 citations
·
Abstract
Relapse-specific mutations in NT5C2 in childhood acute lymphoblastic leukemia.
Nature genetics
· 2013
CE
Christopher E Mason
SL
Sheng Li
JA
Julia A Meyer
PZ
Paul Zumbo
RL
Ross L. Levine
PMID:
23377183
·
PMCID:
PMC3681285
·
DOI
·
260 citations
·
Abstract
The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics.
Nucleic acids research
· 2012
CE
Christopher E Mason
SL
Sheng Li
MB
Marjan Bozinoski
PZ
Paul Zumbo
PMID:
23203872
·
PMCID:
PMC3531109
·
DOI
·
64 citations
·
Abstract
methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles.
Genome biology
· 2012
CE
Christopher E Mason
SL
Sheng Li
FE
Francine E Garrett-Bakelman
ME
Maria E Figueroa
AM
Ari M. Melnick
PMID:
23034086
·
PMCID:
PMC3491415
·
DOI
·
1,738 citations
·
Abstract