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Highlights

  1. 1
    Nature · 2024
    PMID: 38862028PMCID: PMC11357981DOISenior author113 citations
  2. 2
    Cell · 2021
    CBChandrima BhattacharyaMSMaria Sierra GarciaIHIman HajirasoulihaCMCem MeydanCEChristopher E Mason
    PMID: 34043940PMCID: PMC8238498DOISenior author319 citations
  3. 3
    Nature · 2024
    PMID: 38862026PMCID: PMC11357997DOISenior author60 citations

Publications

527 publications

Active

26 grants
  • Co-I
    Mechanisms of cAMP-dependent regulation of melanosome pH
    National Inst of Arthritis & Musculoskeletal & Skin Diseases · 2026–2031
    R01AR077664-06
  • MPI
    SPORE: Adressing Health Disparities in Lymphoma
    National Cancer Institute · 2025–2030 · via MD Anderson Cancer Center
    U54CA302435-01
  • Sub-PI
    Neurobehavioral changes following stressors and radiation (NeuroSTAR): Predicting mission impacts from analogous human and rodent endpoints
    National Aeronautics and Space Administration · 2025–2030 · via Henry M. Jackson Foundation for the Advancement of Military Medicine
    80NSSC25K7731
  • Sub-PI
    VAST Center: Viromes Across Space(s) and Time
    National Institute on Aging · 2025–2030 · via Stanford University
    U54AG089334-02
  • Co-I
    Circulating Antibody Repertoire And Blood-Brain-Barrier Impairment to explain NEuRopsychiatric symptoms of "invisible" brain injury
    U.S. Department of Defense · 2025–2029
    HT9425-25-1-0789
  • Co-I
    SAMBAI: Societal, Ancestry and Molecular Biology Analyses of Inequalities
    Cancer Research UK · 2024–2029
    CGCATF-2023/100030
  • Sub-PI
    The placental epitranscriptome as a novel mechanism behind prenatal metal mixture exposures and child growth and development
    National Institute of Environmental Health Sciences · 2024–2028 · via Columbia University
    R01ES035908-03
  • Sub-PI
    Creating a Microbe-Mineral Atlas to Revolutionize Mining for the Sustainable Energy Transition
    National Science Foundation · 2025–2027 · via Cornell University - Ithaca
    OISE-2435259
  • Sub-PI
    The Immune Niche in the Development of Hematological Malignancies and Implications for Novel Therapy (Core 2: Spatial, Single-cell, and Integrative Informatics and Statistics Core)
    Leukemia & Lymphoma Society · 2022–2027 · via University Health Network
    LLS 7029-22
  • Sub-PI
    BAF complex deregulation in lymphoma
    National Cancer Institute · 2022–2027 · via MD Anderson Cancer Center
    R01CA266279-03
  • Co-I
    Targeting tumor cells dissemination in medulloblastoma
    Pediatric Cancer Foundation · 2026–2027
    PCF 260558-01
  • PI
    The Impact of Spaceflight and Radiation on Clonal Hematopoiesis
    National Aeronautics and Space Administration · 2023–2027
    80NSSC23K0832
  • Sub-PI
    Interactions between dietary fatty acids, seaweed, and bromoform on enteric and manure methane emissions and energetic conversion in lactating dairy cows
    California Department of Food and Agriculture · 2024–2027 · via Cornell University - Ithaca
    23-0936-000-SO
  • Sub-PI
    GeoSeeq Global Genomics Data Lake
    Rockefeller University · 2023–2027 · via BiotiaContract
    SRA 230058-01
  • PI
    Leveraging the microbes of Earth's extreme environments for sustainable plant growth in lunar regolith
    National Aeronautics and Space Administration · 2024–2027
    80NSSC24K0728
  • Sub-PI
    Defining the role of the RNA modification N6-methyladenosine during Flaviviridae virus infection
    National Institute on Aging · 2016–2027 · via Duke University· 2 renewals
    R01AI125416-09
  • Co-I
    A Mass Spectrometry Approach to the Genetic and Epigenetic Mechanisms Controlling Neuronal Identity
    National Institute of Neurological Disorders and Stroke · 2020–2027
    R01NS111997-01A1
  • PI
    Next-Generation Sequencing Benchmarking Study
    Illumina, Inc. · 2026–2027Contract
    SRA 254167-01
  • Sub-PI
    Prenatal Traffic-Related Air Pollutants, Placental Epitranscriptomics, and Child Cognition
    National Institute of Environmental Health Sciences · 2022–2026 · via Columbia University
    R01ES032818-04
  • Sub-PI
    The Epitranscriptome as a Novel Mechanism of Arsenic-Induced Diabetes
    National Institute of Environmental Health Sciences · 2021–2026 · via Columbia University· 2 renewals
    R01ES032638-05S1
  • KP
    Epigenetic basis and therapeutic targeting of the unique lymphoma immunological niche
    National Cancer Institute · 2024–2026
    P01CA272295-02
  • KP
    SAMBAI: Societal, Ancestry and Molecular Biology Analyses of Inequalities
    National Cancer Institute · 2024–2026
    OT2CA297580-01
  • PI
    Spaceflight and Regolith Induced Mitochondrial Stress Mitigated by miRNA-based Countermeasures
    National Aeronautics and Space Administration · 2024–2026
    80NSSC24K1052
  • MPI
    Metagenomic profiling of urinary cell-free DNA to monitor urinary tract infection after kidney transplantation
    National Institute of Allergy and Infectious Diseases · 2020–2026 · via Cornell University - Ithaca
    R01AI151059-02
  • Sub-PI
    LLS SCOR Project: Studying Epigenetic Targeting of Hematological Malignancies
    Leukemia & Lymphoma Society · 2024–2026 · via University of Florida
    7037-25
  • Sub-PI
    Long Term Cell Culture Monitoring System
    National Aeronautics and Space Administration · 2024–2025 · via Wainamics Inc
    80NSSC24CA160
Completed grants (60)
  • Co-I
    Mechanism-Based Targeting of Mantle Cell Lymphoma
    National Cancer Institute · 2018–2025
    P01CA214274-01A1
  • PI
    Colorectal Cancer (CRC) Cellular Heterogeneity, Metastasis, and a Spatially-resolved Molecular Atlas for Colon
    Gastro-Intestinal Research Foundation · 2022–2025
    GIRF 227268-01
  • PI
    Comprehensive biomedical and multi-omic profiling of immune dysregulation with countermeasure development for astronauts
    Boryung Co.,Ltd. · 2024–2025
    BC 233478-01
  • Sub-PI
    Clinical and Molecular Heterogeneity in the Myelodysplastic Syndromes
    National Cancer Institute · 2020–2025 · via New York University Medical Center
    R01CA249054-05
  • PI
    The Spatiotemporal Landscape of the Human Brain Epitranscriptome
    National Institute of Mental Health · 2018–2025
    R01MH117406-05
  • PI
    Spatiotemporal Mapping of the Impact of Spaceflight on the Heart and Brain
    National Aeronautics and Space Administration · 2021–2024
    80NSSC22K0254
  • PI
    Multi-Omic and Cellular Trajectories of Clonal Hematopoiesis in Acute Myeloid Leukemia
    Daiichi Sankyo Co., Ltd. · 2021–2024BioPharma Alliance
    BP 214628-01
  • PI
    High-resolution, murine spatial transcriptome mapping of the impact of spaceflight
    National Aeronautics and Space Administration · 2021–2024
    80NSSC21K0316
  • Sub-PI
    Point-of-care, high throughput LAMP with the MINI
    National Institute on Drug Abuse · 2021–2023 · via University of Miami· 2 renewals
    U01DA053941-02S1
  • Co-I
    Longitudinal functional genomics in mantle cell lymphoma therapy and drug resistance
    Leukemia & Lymphoma Society · 2018–2023
    LLS 180078-01
  • PI
    Airline wastewater profiling and COVID-19 sequencing
    GINKGO BIOWORKS · 2022–2023Contract
    SA 224501-01
  • Sub-PI
    Paper-COVID - Platform for High-throughput SARS-CoV-2 Screening and Contact Tracing
    National Institute of Biomedical Imaging and Bioengineering · 2021–2023 · via Cornell University - Ithaca
    R21EB031466-01
  • PI
    TINY COVID: Rapid, Mobile, and Point-of-care Diagnostics for SARS-CoV-2 from Saliva
    Pershing Square Foundation · 2020–2023
    PSF 210410-01
  • PI
    Addgene 705089
    Addgene, Inc. · 2022–2023
    Addgene 705089
  • PI
    Addgene 700683
    Addgene, Inc. · 2022–2023
    Addgene 700683
  • Sub-PI
    Standard Omics Measures for Astronauts (SOMA): Comprehensive Biomedical and Multiomic Profiling and the Aerospace Medicine Biobank
    National Aeronautics and Space Administration · 2021–2022 · via Baylor College of Medicine
    NNX16AO69A
  • Sub-PI
    Therapeutic Implications of Altered Epignetics and DNA Damage Responses in Hematologic Disorders - CORE B
    Leukemia & Lymphoma Society · 2016–2022 · via University Health Network
    UHN LLS SCOR 9328-16
  • Sub-PI
    PROFILING THE BRAIN MICROBIOME OF PRECLINICAL ALZHEIMER'S DISEASE, MILD COGNITIVE IMPAIRMENT, AND NEURODEGENERATIVE DISEASE
    The Benter Foundation · 2019–2022 · via AZ Board of Regents on behalf of Arizona State University
    ASU 2019-26
  • PI
    XPRIZE Rapid COVID Testing PRIZE Collaboration Partner Agreement
    XPRIZE Foundation, Inc. · 2021–2022Contract
    No publications yet
    XPRIZE 212173-01
  • PI
    Dietary regulation of cancer immunity
    Starr Cancer Consortium · 2020–2022
    SCC I13-0052
  • Co-I
    Risk Genes and Environment Interactions in NTDs
    Eunice Kennedy Shriver National Institute of Child Health and Human Development · 2016–2022
    P01HD067244-10
  • PI
    Mapping the Impact of SARS-CoV-2 Variants on Testing and Clinical Outcomes
    Testing for America, LLC · 2021–2022
    TA 215322-01
  • Sub-PI
    Identification of the genetic and transcriptomic networks of cognitive and neuropathological resilience to Alzheimer's disease associated viruses
    National Institute on Aging · 2019–2022 · via AZ Board of Regents on behalf of Arizona State University
    No publications yet
    R01AG061835-02
  • Co-I
    The impact of human spaceflight on clonal hematopoiesis
    National Aeronautics and Space Administration · 2020–2021
    80NSSC20K1841
  • MPI
    Adapting KS-Detect technology to high-throughput COVID-19 screening
    National Cancer Institute · 2020–2021 · via Cornell University - Ithaca
    UH3CA202723-05S1
  • Co-I
    Novel Computational Models and Algorithms for Mapping Link-Read Sequencing Data
    National Science Foundation · 2018–2021
    NSF IIS-1840275
  • PI
    Tri Party Agreement MCW Racine WCM
    Medical College of Wisconsin · 2020–2021
    MCW 205278-01
  • PI
    TINY COVID - Rapid Point-of-care diagnostics for SARS-CoV-2 Screening
    Cornell University - Ithaca · 2020–2021
    CU 136612-20824
  • Sub-PI
    Identification of the genetic and transcriptomic networks of cognitive and neuropathological resilience to Alzheimer's disease associated viruses
    National Institute on Aging · 2019–2021 · via AZ Board of Regents on behalf of Arizona State University
    U01AG061835-03
  • PI
    Delineating Sperm Heterogeneity with Single-Cell Omics (Alliance with Ohana)
    Ohana Biosciences · 2020–2021BioPharma Alliance
    OB 204314-01
  • Sub-PI
    JPL-SAF Metagenscope project
    National Aeronautics and Space Administration · 2018–2020 · via Jet Propulsion Laboratory - California Institute of Technology
    NASA- JPL SUB #1610215
  • PI
    Mapping the RNA Modification N6-methyladenosine During Zika Virus Infection
    National Institute of Allergy and Infectious Diseases · 2017–2020
    R21AI129851-02
  • PI
    Order # 75F40119P10293; Req # 1217015; Human Whole Genome Sequencing (WGS)
    United States Food & Drug Administration · 2019–2020
    75F40119P10293
  • PI
    Single-Cell Resolution of Leukemia’s Epigenetic Evolution During Therapy
    Pershing Square Foundation · 2016–2020
    PSF 19-20
  • Sub-PI
    Omics in Space (OIS): Technology Development for Omics Instrumentations and Biomolecule Measurements
    National Aeronautics and Space Administration · 2019–2020 · via Jet Propulsion Laboratory - California Institute of Technology
    JPL 1626502
  • PI
    Integrative Single-cell Analysis of Hematological Malignancies
    Daiichi Sankyo Co., Ltd. · 2018–2020Contract
    DS 192276-01
  • Sub-PI
    Fungal Diversity Associated with Spacecraft Assembly Facilities (Subcontract #1610217)
    National Aeronautics and Space Administration · 2018–2019 · via Jet Propulsion Laboratory - California Institute of Technology
    JPL 1610217
  • PI
    Charting the human epitranscriptome
    University of New South Wales · 2018–2019Contract
    SRA 191222-01
  • Sub-PI
    In-Flight Metagenomic Monitoring of Infections and Associated Host Responses in Astronauts
    National Aeronautics and Space Administration · 2019–2019 · via University of California, San Francisco
    NNX16A069A
  • Sub-PI
    Planetary Protection Project (DNA Extraction)
    National Aeronautics and Space Administration · 2019–2019 · via Jet Propulsion Laboratory - California Institute of Technology
    JPL 1622363
  • PI
    AMENDMENT - Charting the human Epitranscriptome
    University of New South Wales · 2018–2019Contract
    UNSW 200084-01
  • PI
    Precision Blood Profiling Technologies for Health and Disease
    Weill Cornell Medical College · 2018–2019
    WCMC Seed Grant 191742-01
  • Co-I
    ECOG-ACRIN Integrated Leukemia Translational Science Center
    National Cancer Institute · 2014–2019 · via Montefiore Medical Center
    U10CA180827-05
  • PI
    New Proposal Created for Jazmin Kirby on 15-Feb-2018 12:44:47 PM
    Illumina, Inc. · 2018–2019Contract
    CDA 183108-01
  • PI
    Order 381439: Material Transfer Agreement
    Addgene, Inc. · 2018–2019Contract
    381439
  • PI
    Epigenetic Control of DNA Transposition in Embryonal Cancers
    Starr Cancer Consortium · 2016–2018
    SCC I9-A9-071
  • PI
    An Integrated Framework for Characterization of the Noncoding Genome and Epigenome in Astronauts
    National Aeronautics and Space Administration · 2016–2018
    NNX17AB26G
  • Sub-PI
    Community Research Education and Engagement for Data Science (CREEDS)
    National Institute of Biomedical Imaging and Bioengineering · 2015–2018 · via Mount Sinai School of Medicine
    R25EB020393-03
  • Sub-PI
    3D Microbial Contamination Mapping of M2020 Descent Stage Subsystem
    National Aeronautics and Space Administration · 2017–2018 · via Jet Propulsion Laboratory - California Institute of Technology
    JPL 1588230
  • PI
    HERO - Differential Effects on Homozygous Twin Astronauts Associated with Differences in Exposure to Spaceflight Factors
    National Aeronautics and Space Administration · 2014–2018
    NNX14AH50G
  • PI
    FDA SEQC2 Project (HHSF223201610175A)
    United States Food & Drug Administration · 2017–2017
    HHSF223201610175A
  • PI
    FDA SEQC2 Project (HHSF223201610272A)
    United States Food & Drug Administration · 2017–2017
    HHSF223201610272A
  • PI
    Custom Human Whole Genome Sequencing (WGS)
    United States Food & Drug Administration · 2017–2017
    HHSF223201510066A
  • PI
    Delineating Clinical Response with Single-Cell Omics
    AbbVie Inc. · 2016–2017Contract
    Abbvie RAA
  • KP
    Epigenome Interactions in Complex Neurogenetic Disorders
    National Institute of Neurological Disorders and Stroke · 2011–2017
    R01NS076465-05 EW
  • KP
    A Molecular Pathway Controlling Cardiomyocyte Specification
    National Heart, Lung, and Blood Institute · 2011–2016
    R01HL111400-04
  • KP
    Defining Molecular Biomarkers for CDK4/6-Based Cancer Therapy by RNA Sequencing
    National Cancer Institute · 2013–2016
    R21CA176362-02 EW
  • Sub-PI
    Study of Neural Tube Defects Etiology: Genome and Exposome
    National Institute of Environmental Health Sciences · 2014–2015 · via University of Texas, Austin
    R01ES021006-01 EW
  • Sub-PI
    Integrative Analysis Tools to Dissect Cell-Type Specific Transcriptional Programs in Mammalian Cells
    National Human Genome Research Institute · 2012–2015 · via Sloan-Kettering Institute for Cancer Research
    R01HG006798-03
  • Sub-PI
    Software Systems for Detecting Rare Mutations
    National Human Genome Research Institute · 2011–2012 · via Geospiza, Inc.
    R44HG005297-03

Clinical research

4 studies

Active

1 study
  • PI
    Multi-Omics, Physiological, and Clinical Analysis of Human Spaceflight
    Weill Medical College of Cornell University · OPEN TO ACCRUAL (as of 2021)
Completed & closed trials (3)
  • PI
    Rapid Diagnosis of Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2)
    WorldQuant Foundation · IRB STUDY CLOSURE (as of 2026)
  • PI
    Early Risk Assessment for COVID-19 Patients Using Clinical Care Data
    WorldQuant Foundation · IRB STUDY CLOSURE (as of 2026)
  • PI
    Multimodal Evaluation of Spaceflight Health - Axiom 1 (MESH-AX-1)
    Baylor College of Medicine · IRB STUDY CLOSURE (as of 2023)

Available technologies

News mentions

Show 12 more mentions
5 MD students · 22 PhD students · 5 Postdocs

External relationships

Leadership Roles

University of Pittsburgh

Ownership

Acuamark Diagnostics · Bevimi INC · BioAstra · Cellanome, Inc · Colossal Biosciences Inc. · Deep Space Biology · Inso Biosciences, Inc. · Nurture Genomics INC · Radence · Romix Biosciences INC · Seed Health, Inc. · Ursa Biotechnologies · Via Scientific INC · Whole Biome, Inc. · WorldQuant Foundry

Advisory/Scientific Board Member

Acuamark Diagnostics · Basecamp Research LTD · Bevimi INC · BioAstra · Bumrungrad International Hospital · Cellanome, Inc · Claryx INC · Colossal Biosciences Inc. · Deep Space Biology · Inso Biosciences, Inc. · MetaSUB · New England Biolabs · Radence · Romix Biosciences INC · Seed Health, Inc. · Seer, Inc. · Ursa Biotechnologies · Via Scientific INC · Whole Biome, Inc. · WorldQuant Foundry

Proprietary Interest

MIT Press

Other

Biotia